The following report was produced in preparation for a workshop in March 1997. The model parameters discussed here has been superceded by the Zone 4 Metapopulation Model, based on the discussions in that workshop.

Parameters of the Marbled Murrelet Models

H. Resit Akcakaya
Applied Biomathematics
100 North Country Road
Setauket, NY 11733
Tel: 516-751-4350
Fax: 516-751-3435
e-mail: resit@ramas.com

February 1997

This document describes the parameters of the Marbled Murrelet models that will be discussed at a workshop on 4 March 1997. The list of parameters and their possible ranges described below are based on discussions in the previous workshop, on 22-23 November 1996 at Lewis and Clark College in Portland, Oregon. All parameters mentioned below will be discussed and may be subject to change as a result of these discussions. However, particular attention should be given to those for which we did not have any ranges discussed in the November workshop, including

General model structure


Using the population modeling program RAMAS GIS (Akcakaya 1995), we will
develop three stage-structured, stochastic population models:

   (1) metapopulation model of all Marbled Murrelets in CA, OR, and WA (about 6
       populations),

   (2) metapopulation model of Marbled Murrelets in CA (about 3 populations),

   (3) single population or metapopulation model of Marbled Murrelets in the
       "bioregion".

The workshop on March 4th will concentrate on (1) and (2) only.

Stage matrix and density dependence


The within-population dynamics of the models will be described by a stage
matrix (Caswell 1989), whose elements are the vital rates (survival rates and
fecundity) of juveniles (0-12 months), subadults (12-24 months) and adults (24+
months).  The vital rates estimated by Beissinger (1995) provide a good
starting point for the stage matrix.

The stage matrix (survival rates and fecundity) must be considered in
conjunction with density dependence.  Three combinations of stage matrix and
density dependence were considered at the November workshop:

(1) Ceiling-type of density dependence with the following stage matrix based on
   Beissinger (1995):

                Juv.    SubAd.    Adult
       Juv:    0.0000   0.0000   0.1050
     SubAd:    0.6125   0.0000   0.0000
     Adult:    0.0000   0.7770   0.8750

   This model results in an average decline of 7% per year.  The decline may be
   faster, especially at the beginning of the simulated time period, depending
   on the variation and the carrying capacity (see below).

(2) Ceiling-type of density dependence with the following stage matrix:

                Juv.    SubAd.    Adult
       Juv:    0.0000   0.0000   0.1620
     SubAd:    0.6300   0.0000   0.0000
     Adult:    0.0000   0.7992   0.9000

   This model results in a deterministically stationary population (i.e.,
   average growth rate 0% per year).  However, because of the ceiling-type of
   density dependence imposed, the predicted abundance may decline, depending
   on the variation and the carrying capacity (see below).

(3) Contest (Beverton-Holt) type of density dependence with a stable carrying
   capacity.  In this case, the maximum rate of population growth at low
   densities (when there are no density effects) must also be specified, and
   was estimated as 1.06 (6% growth per year) based on an assumption of a
   maximum of 1 chick fledged per nest.

   The contest (Beverton-Holt) type density dependence may arise when the
   limitation ("ceiling") acts only on the breeding population, and the adults
   in excess of this ceiling become non-breeders, decreasing the average number
   of chicks per adult in the population.  In contrast, the ceiling model
   assumes that all stages are limited; individuals in excess of the ceiling
   are assumed to be dead.

The parameters (vital rates) in the stage matrix may be modified according to
the trend in abundance (growth or decline rate) predicted from an analysis of
off-shore count and in-land detection data.

Carrying capacity or population ceiling


The population growth of Marbled Murrelets may be limited by food and/or
nesting sites.  The observed population changes may reflect a deterministic
decline to extinction (systemic pressure), a decline to an equilibrium
abundance (carrying capacity) or to a ceiling that is lower than the current
abundance, or fluctuations without a significant trend.

Density dependence should be modeled with several models (see above).  These
require a carrying capacity estimate for each population in a metapopulation.
In the November workshop, we modeled a single population, and assumed that
carrying capacity was equal to initial abundance (see below).

Allee effects or population extinction threshold


Another type of density dependence involves Allee effects which may arise from
the negative effects of low abundances on the genetics and social structure of
the population.  Such effects may be modeled by a local (population-specific)
extinction threshold, below which the population is assumed to be extinct.  The
value of such a threshold may be set as a fixed number (such as 2, 4 or 6
individuals), or as a percentage of the carrying capacity (e.g.,  1%, 2% or
3%).

Initial abundance


The initial abundance of each population in a metapopulation model may be based
on data from off-shore counts and in-land detections.  In the November
workshop, we modeled a single (bioregion) population and used a total of 1,700
birds as the initial size of this population.  For the two metapopulation
models that will be considered at the March workshop, the range of abundances
of each population will be determined by the discussion among the workshop
participants.

The initial distribution of individuals to stages (juvenile, subadult, adult)
probably will not affect the results very much.  A low proportion (e.g., 6%)
may be used for juveniles to reflect the off-shore counts.  In the November
workshop, we used 6%, 12% and 82% juveniles, subadults, and adults,
respectively.

Stochasticity (variation)


There are no data on the temporal (year-to-year) variation in survival rates or
fecundities of Marbled Murrelet populations.  If such data can be found for
other alcids, they could be analyzed to estimate the coefficients of variation
in vital rates.  A better alternative is to use the temporal variation in
off-shore counts (or in-land detections) to estimate the variation in vital
rates.  This may be done by progressively increasing the variation in model
parameters until the temporal variation in predicted abundance matches the
temporal variation observed in the data.  This iterative process necessarily
results in a crude and approximate estimate, but will be preferable to data
from other species.  In the November workshop, we used the following two sets:

CV of fecundity (F) and juvenile survival (Sj):  15%, 30%

CV of subadult survival (Ss) and adult survival (Sa):  5%, 10%

In addition to environmental variations, the model will incorporate demographic
stochasticity in survival, reproduction and dispersal (Akcakaya 1991).

Catastrophes


Rare and extreme changes in vital rates ("catastrophes") may occur due to fires
on land, oil spills off-shore, and other marine events.  The frequency of such
events should be calculated from historical data on frequency and impact of oil
spills, frequency and size of fires, and marine cycles.

Modeling catastrophes requires two types of information:  The probability of
the catastrophes (e.g., 0.01 for 1 in 100 years), and the effect of
catastrophes (e.g., 50% additional juvenile mortality, or 10% decline in
carrying capacity).

In the November workshop we assumed no catastrophes.

Correlation


The degree of similarity among the year-to-year fluctuations of different
populations may have important effects on metapopulation viability.  In the
November workshop we did not have to consider this, because we were focusing on
a single population model.  Time series data on in-land detections or off-shore
counts form several locations (preferably far-away from each other) will give
clues about the possible range of these parameters.  However, such data are
unlikely to become available in the short-run.  Instead, we may simply consider
the extremes of no correlation and full correlation.

Dispersal


Another set of metapopulation-level parameters that we did not have to consider
in the November workshop involve dispersal among populations.  Here dispersal
refers to the movement of individuals from one population to another at the
annual time scale.  It is very unlikely that there will be any data on this.
At the March workshop, we will have to come up with a maximum possible rate of
dispersal, and use it, together with a zero dispersal rate, as a wide range of
possible parameter values.

Effect of logging


The PVA model will be used to analyze the viability of the Marbled Murrelet
under three options:

(1) logging in all Pacific Lumber Company land ("full logging"),

(2) logging in part of the Pacific Lumber Company land as specified in a
proposed agreement ("partial logging"), and

(3) no logging.

In all three cases, the effect of logging will be modeled as a decrease in the
carrying capacity (or ceiling) of the model, in proportion to the decrease in
total habitat suitability (i.e., decrease in available habitat, weighted by the
suitability of the habitat).

This effect should be quantified with an analysis of the GIS data on the
habitat characteristics.  However, such data is not likely to become available
soon.  In the absence of such data, we will use approximate ranges suggested by
workshop participants.

In the November workshop, where we considered only the local ("bioregion")
population, we made the following assumptions:

  Habitat in currently protected areas:      7,000 to 21,000 acres.
  Total habitat in Pacific Lumber land:      7,000 acres.
  Habitat in P.L. land to be preserved:      3,500 acres.
  Total habitat in the bioregion:            14,000 to 28,000 acres

Option 3 (no logging):  0% decrease in carrying capacity (K)

Option 2 (partial logging):  3,500 of 14,000-28,000 acres logged, i.e., 3.5/14
to 3.5/28, or 25% to 12% decrease in K.

Option 1 (full logging): 7,000 of 14,000-28,000 acres logged, i.e., 7/14 to
7/28, or 50% to 25% decrease in K.

Logging may also effect the vital rates, for example, through increased edge
effects that may cause an increase in predator densities.  This effect could be
studied with data from an experimental study in Washington that uses artificial
nests to measure predator pressure in different habitat types and
configurations.  This effect may be especially important in the full logging
option, but may be unimportant or negligible in the partial logging case.  This
is because the partial logging will target small fragments of suitable habitat,
and leave larger patches relatively unimpacted.

Cumulative impacts


The effect of the three options should be considered within the context of
similar impacts on Marbled Murrelet habitat in other parts of the bioregion, as
well as in other regions in California, Oregon and Washington.  These
cumulative effects should be characterized by discussion among the participants
of the March workshop.

Time horizon and metapopulation threshold


The results of the PVA will be expressed as increases in the risk of decline
with partial or full logging, from the risk of decline with no logging.  Two
parameters must be specified for the presentation of these results: the decline
threshold (amount of decline) and a time horizon (number of years for which to
make the prediction).  Results should be presented for two different numerical
values of each of these parameters.  One numerical value should be fixed (such
as 50 years for the time horizon, and 90% decline for the amount of decline).
The other numerical value should be specific to the comparison, giving the
result for the threshold and time horizon for which the change in risk was
maximum.  This is necessary because it may be impossible to find the amount of
decline and time horizon appropriate for all cases; case-specific time horizons
and decline thresholds, in addition to fixed ones, will allow the selection of
the appropriate criteria for assessment.

References


Akcakaya, H.R. 1991. A method for simulating demographic stochasticity.
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Akcakaya, H.R. 1995.  RAMAS GIS: Linking Landscape Data with Population
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Akcakaya, H.R. and J.L. Atwood. 1997.  A habitat-based metapopulation model of
   the California Gnatcatcher.  Conservation Biology 11 (in press).

Akcakaya, H.R., and B. Baur. 1996.  Effects of population subdivision and
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Akcakaya, H.R., M.A. McCarthy, and J. Pearce. 1995.  Linking landscape data
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Beissinger, S.B. 1995.  Population trends of the Marbled Murrelet projected
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Boyce, M. 1996. Review of RAMAS/GIS. Quarterly Review of Biology 71:167-168.

Caswell, H. 1989.  Matrix Population Models: Construction, Analysis, and
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Ferson, S. and L.R. Ginzburg. 1996. Different methods are needed to propagate
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Ginzburg, L.R. and L. Goldwasser. 1997. Variability and measurement error in
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Kingston, T. 1995. Valuable modeling tool: RAMAS/GIS: Linking Landscape Data
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