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Opportunities for microbiology citizen science: lessons learnt from three pilot projects

part of Citizen Science

This paper provided recommendations for microbiology citizen science projects. Among other key recommendations, the authors encourage prospective citizen science practitioners to be aware of time and ethical considerations, to keep sampling methods simple but robust, and to get creative to maintain participant engagement.

Rachel Pateman, Lucy Way, Sarah West / Published on 7 May 2025

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Citation

Pateman, R. M., Bennett, J., Hilton A. C., Romeo-Melody, I., Rosenfeld, A., Routledge, S. J., Rymer, C., Swift, B. M. C., Way, L., Whatford, L., Wilkinson, N. C., Worthington, T., Yandle, L., Younis, A. S., West, S. E., & Goddard, A. D. (2025). Opportunities for microbiology citizen science: lessons learnt from three pilot projects. Access Microbiology 7(4). https://doi.org/10.1099/acmi.0.000899.v3.

The study of microbes presents exciting opportunities to contribute towards the Sustainable Development Goals. As underscored by the American Society for Microbiology, microbes “know no borders” and their tolerance for extreme environments indicates their potential to help address the global polycrisis.

Citizen science (CS) methods offer innovative ways to do microbiology research. Though the practice of CS has gained traction over the past two decades, its adoption in microbiology is limited. To improve the prospects of CS in microbiology, the authors of this paper discussed how CS and microbiology align well: microbiology presents clear relevance to people’s lives, and CS gives participants a stake in real-world impacts.

close up of a man's hands using a large knife to cut a red onion on a wooden chopping board.

In one CS project, participants undertook research on chopping board use and its subsequent impact on a chopping board's microbiome.

Photo: Brian J. Tromp / Unsplash

In this paper, the authors reflect on three pilot projects: 

  • SuperYeast: researchers worked with participants to crowdsource yeast strains from home-baking and home-brewing projects, among other sources, to test them for ethanol and sugar tolerance. 
  • Exploring the chopping board microbiome: underrepresented communities at a UK university and a team of scientists co-created approaches for exploring microbial contamination on chopping boards.
  • CS and antimicrobial resistance: researchers and home-growers collaborated to better understand the presence of antimicrobial resistant bacteria in the non-commercial cultivation and preparation of salad crops.

Each project had its own successes and challenges and the authors discussed their learnings in detail. The researchers had successes with creating simple, low-cost methods to collect samples via participants, and student helpers gained scientific experience which assisted with their future careers. However, a common issue for all three projects was participant recruitment: unintended clashes with participants’ schedules due to procedural delays and/or the impacts of the Covid-19 pandemic were keenly felt.

The paper contains eight key recommendations which can be explored in depth, but the team offered two broad advisory notes to improve uptake of CS methodologies. Firstly, the authors urged those who review standard grant applications to be more accepting of the costs involved in using CS methods. Second, the authors experienced significant bottlenecks when seeking ethical approval from institutions not well-versed in CS work. They suggest that these institutions streamline their processes or bring in external expertise so as not to delay projects. 

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SEI authors

Rachel Pateman

SEI Affiliated Researcher

Lucy Way

Project Manager

SEI York

Sarah West

Professor and Centre Director

SEI York

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Access Microbiology Open access
Topics and subtopics
Health : Wellbeing
Related centres
SEI York
Regions
United Kingdom